Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG10825.1 | CDG12432.1 | SMDB11_0233 | SMDB11_1856 | Dipeptide transporter. | Probable pyruvate-flavodoxin oxidoreductase. | 0.772 |
CDG10825.1 | CDG15017.1 | SMDB11_0233 | SMDB11_4458 | Dipeptide transporter. | Methyl-accepting chemotaxis protein. | 0.900 |
CDG10825.1 | dppA | SMDB11_0233 | SMDB11_2828 | Dipeptide transporter. | Periplasmic dipeptide transport protein precursor. | 0.903 |
CDG10825.1 | dppA-2 | SMDB11_0233 | SMDB11_4244 | Dipeptide transporter. | Dipeptide transporter. | 0.903 |
CDG10825.1 | dppB | SMDB11_0233 | SMDB11_4245 | Dipeptide transporter. | Dipeptide transporter. | 0.965 |
CDG10825.1 | dppC | SMDB11_0233 | SMDB11_4246 | Dipeptide transporter. | Dipeptide transporter. | 0.963 |
CDG10825.1 | dppD | SMDB11_0233 | SMDB11_4247 | Dipeptide transporter. | Dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.908 |
CDG10825.1 | dppF | SMDB11_0233 | SMDB11_4248 | Dipeptide transporter. | Dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.928 |
CDG10825.1 | sapC | SMDB11_0233 | SMDB11_1882 | Dipeptide transporter. | Peptide ABC transporter, permease protein. | 0.767 |
CDG10825.1 | tap | SMDB11_0233 | SMDB11_2231 | Dipeptide transporter. | Methyl-accepting chemotaxis protein. | 0.900 |
CDG12432.1 | CDG10825.1 | SMDB11_1856 | SMDB11_0233 | Probable pyruvate-flavodoxin oxidoreductase. | Dipeptide transporter. | 0.772 |
CDG12432.1 | dppA | SMDB11_1856 | SMDB11_2828 | Probable pyruvate-flavodoxin oxidoreductase. | Periplasmic dipeptide transport protein precursor. | 0.772 |
CDG12432.1 | dppA-2 | SMDB11_1856 | SMDB11_4244 | Probable pyruvate-flavodoxin oxidoreductase. | Dipeptide transporter. | 0.772 |
CDG15017.1 | CDG10825.1 | SMDB11_4458 | SMDB11_0233 | Methyl-accepting chemotaxis protein. | Dipeptide transporter. | 0.900 |
CDG15017.1 | dppA | SMDB11_4458 | SMDB11_2828 | Methyl-accepting chemotaxis protein. | Periplasmic dipeptide transport protein precursor. | 0.900 |
CDG15017.1 | dppA-2 | SMDB11_4458 | SMDB11_4244 | Methyl-accepting chemotaxis protein. | Dipeptide transporter. | 0.900 |
CDG15017.1 | tap | SMDB11_4458 | SMDB11_2231 | Methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis protein. | 0.911 |
dppA | CDG10825.1 | SMDB11_2828 | SMDB11_0233 | Periplasmic dipeptide transport protein precursor. | Dipeptide transporter. | 0.903 |
dppA | CDG12432.1 | SMDB11_2828 | SMDB11_1856 | Periplasmic dipeptide transport protein precursor. | Probable pyruvate-flavodoxin oxidoreductase. | 0.772 |
dppA | CDG15017.1 | SMDB11_2828 | SMDB11_4458 | Periplasmic dipeptide transport protein precursor. | Methyl-accepting chemotaxis protein. | 0.900 |
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