Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG11367.1 | CDG11368.1 | SMDB11_0786 | SMDB11_0787 | Putative glutamate synthase; Belongs to the glutamate synthase family. | Putative signal transduction protein. | 0.452 |
CDG11368.1 | CDG11367.1 | SMDB11_0787 | SMDB11_0786 | Putative signal transduction protein. | Putative glutamate synthase; Belongs to the glutamate synthase family. | 0.452 |
CDG11368.1 | CDG11369.1 | SMDB11_0787 | SMDB11_0788 | Putative signal transduction protein. | Putative signal transduction protein. | 0.646 |
CDG11368.1 | arcB | SMDB11_0787 | SMDB11_3577 | Putative signal transduction protein. | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | 0.605 |
CDG11368.1 | barA | SMDB11_0787 | SMDB11_0107 | Putative signal transduction protein. | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | 0.566 |
CDG11368.1 | ttrS | SMDB11_0787 | SMDB11_2648 | Putative signal transduction protein. | Two-component system sensor kinase for tetrathionate reductase complex. | 0.625 |
CDG11369.1 | CDG11368.1 | SMDB11_0788 | SMDB11_0787 | Putative signal transduction protein. | Putative signal transduction protein. | 0.646 |
CDG11369.1 | arcB | SMDB11_0788 | SMDB11_3577 | Putative signal transduction protein. | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | 0.700 |
CDG11369.1 | barA | SMDB11_0788 | SMDB11_0107 | Putative signal transduction protein. | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | 0.675 |
arcB | CDG11368.1 | SMDB11_3577 | SMDB11_0787 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | Putative signal transduction protein. | 0.605 |
arcB | CDG11369.1 | SMDB11_3577 | SMDB11_0788 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | Putative signal transduction protein. | 0.700 |
arcB | barA | SMDB11_3577 | SMDB11_0107 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | 0.985 |
arcB | ttrS | SMDB11_3577 | SMDB11_2648 | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | Two-component system sensor kinase for tetrathionate reductase complex. | 0.845 |
barA | CDG11368.1 | SMDB11_0107 | SMDB11_0787 | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | Putative signal transduction protein. | 0.566 |
barA | CDG11369.1 | SMDB11_0107 | SMDB11_0788 | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | Putative signal transduction protein. | 0.675 |
barA | arcB | SMDB11_0107 | SMDB11_3577 | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | 0.985 |
barA | ttrS | SMDB11_0107 | SMDB11_2648 | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | Two-component system sensor kinase for tetrathionate reductase complex. | 0.859 |
ttrS | CDG11368.1 | SMDB11_2648 | SMDB11_0787 | Two-component system sensor kinase for tetrathionate reductase complex. | Putative signal transduction protein. | 0.625 |
ttrS | arcB | SMDB11_2648 | SMDB11_3577 | Two-component system sensor kinase for tetrathionate reductase complex. | Hybrid sensory histidine kinase in two-component regulatory system with ArcA. | 0.845 |
ttrS | barA | SMDB11_2648 | SMDB11_0107 | Two-component system sensor kinase for tetrathionate reductase complex. | Hybrid sensory histidine kinase in two-component regulatory system with UvrY. | 0.859 |