Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG11188.1 | CDG11419.1 | SMDB11_0605 | SMDB11_0838 | Hypothetical protein. | Major facilitator superfamily protein. | 0.438 |
CDG11417.1 | CDG11418.1 | SMDB11_0836 | SMDB11_0837 | Putative membrane protein. | Putative membrane protein. | 0.982 |
CDG11417.1 | CDG11419.1 | SMDB11_0836 | SMDB11_0838 | Putative membrane protein. | Major facilitator superfamily protein. | 0.486 |
CDG11418.1 | CDG11417.1 | SMDB11_0837 | SMDB11_0836 | Putative membrane protein. | Putative membrane protein. | 0.982 |
CDG11418.1 | CDG11419.1 | SMDB11_0837 | SMDB11_0838 | Putative membrane protein. | Major facilitator superfamily protein. | 0.486 |
CDG11419.1 | CDG11188.1 | SMDB11_0838 | SMDB11_0605 | Major facilitator superfamily protein. | Hypothetical protein. | 0.438 |
CDG11419.1 | CDG11417.1 | SMDB11_0838 | SMDB11_0836 | Major facilitator superfamily protein. | Putative membrane protein. | 0.486 |
CDG11419.1 | CDG11418.1 | SMDB11_0838 | SMDB11_0837 | Major facilitator superfamily protein. | Putative membrane protein. | 0.486 |
CDG11419.1 | CDG11420.1 | SMDB11_0838 | SMDB11_0839 | Major facilitator superfamily protein. | Putative substrate-binding transport protein. | 0.493 |
CDG11419.1 | CDG11671.1 | SMDB11_0838 | SMDB11_1095 | Major facilitator superfamily protein. | Putative membrane protein. | 0.412 |
CDG11419.1 | CDG12184.1 | SMDB11_0838 | SMDB11_1610 | Major facilitator superfamily protein. | Rhs-family protein. | 0.489 |
CDG11419.1 | CDG12853.1 | SMDB11_0838 | SMDB11_2278 | Major facilitator superfamily protein. | Rhs-family protein. | 0.542 |
CDG11420.1 | CDG11419.1 | SMDB11_0839 | SMDB11_0838 | Putative substrate-binding transport protein. | Major facilitator superfamily protein. | 0.493 |
CDG11671.1 | CDG11419.1 | SMDB11_1095 | SMDB11_0838 | Putative membrane protein. | Major facilitator superfamily protein. | 0.412 |
CDG12184.1 | CDG11419.1 | SMDB11_1610 | SMDB11_0838 | Rhs-family protein. | Major facilitator superfamily protein. | 0.489 |
CDG12853.1 | CDG11419.1 | SMDB11_2278 | SMDB11_0838 | Rhs-family protein. | Major facilitator superfamily protein. | 0.542 |