Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cycAD-serine/D-alanine/glycine permease. (466 aa)    
Predicted Functional Partners:
CDG12474.1
Putative formate acetyltransferase 3.
      
 0.695
potG
Putrescine transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
      
 0.687
cydX
Hypothetical protein.
      
 0.685
codA
Cytosine deaminase.
      
 0.607
hisI
Fused phosphoribosyl-AMPcyclohydrolase/phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
      
 0.541
mglB
Methyl-galactoside transporter subunit.
      
 0.499
nhaR
DNA-binding transcriptional activator; Belongs to the LysR transcriptional regulatory family.
      
 0.450
pflB
Pyruvate formate lyase I.
      
 0.428
Your Current Organism:
Serratia marcescens
NCBI taxonomy Id: 273526
Other names: S. marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens str. Db11, Serratia marcescens subsp. marcescens strain Db11
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