STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDG11947.1Putative fimbrial protein. (310 aa)    
Predicted Functional Partners:
CDG11949.1
Putative fimbrial chaperone protein.
 
 
 0.961
CDG11948.1
Fimbrial outer membrane usher protein.
 
  
 0.948
CDG11950.1
Putative fimbrial protein.
 
     0.918
CDG11952.1
Putative fimbrial protein.
 
     0.915
CDG11951.1
Putative fimbrial protein.
 
     0.909
CDG14199.1
Putative O-antigen polymerase.
  
     0.644
CDG11946.1
Hypothetical protein.
       0.489
tsx
Nucleoside-specific channel-forming protein.
  
     0.462
ORF1
Putative exported protein.
  
     0.462
CDG12121.1
Putative membrane protein.
  
     0.461
Your Current Organism:
Serratia marcescens
NCBI taxonomy Id: 273526
Other names: S. marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens str. Db11, Serratia marcescens subsp. marcescens strain Db11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.