Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG10983.1 | CDG12227.1 | SMDB11_0393 | SMDB11_1651 | Major facilitator superfamily protein. | Major facilitator superfamily protein. | 0.413 |
CDG12042.1 | CDG12227.1 | SMDB11_1467 | SMDB11_1651 | Major facilitator superfamily protein. | Major facilitator superfamily protein. | 0.413 |
CDG12225.1 | CDG12226.1 | SMDB11_1649 | SMDB11_1650 | DeoR-family transcriptional regulator. | Putative oxidoreductase. | 0.753 |
CDG12225.1 | CDG12227.1 | SMDB11_1649 | SMDB11_1651 | DeoR-family transcriptional regulator. | Major facilitator superfamily protein. | 0.514 |
CDG12226.1 | CDG12225.1 | SMDB11_1650 | SMDB11_1649 | Putative oxidoreductase. | DeoR-family transcriptional regulator. | 0.753 |
CDG12226.1 | CDG12227.1 | SMDB11_1650 | SMDB11_1651 | Putative oxidoreductase. | Major facilitator superfamily protein. | 0.531 |
CDG12227.1 | CDG10983.1 | SMDB11_1651 | SMDB11_0393 | Major facilitator superfamily protein. | Major facilitator superfamily protein. | 0.413 |
CDG12227.1 | CDG12042.1 | SMDB11_1651 | SMDB11_1467 | Major facilitator superfamily protein. | Major facilitator superfamily protein. | 0.413 |
CDG12227.1 | CDG12225.1 | SMDB11_1651 | SMDB11_1649 | Major facilitator superfamily protein. | DeoR-family transcriptional regulator. | 0.514 |
CDG12227.1 | CDG12226.1 | SMDB11_1651 | SMDB11_1650 | Major facilitator superfamily protein. | Putative oxidoreductase. | 0.531 |
CDG12227.1 | CDG14781.1 | SMDB11_1651 | SMDB11_4222 | Major facilitator superfamily protein. | Putative secretion protein. | 0.505 |
CDG12227.1 | CDG14919.1 | SMDB11_1651 | SMDB11_4359 | Major facilitator superfamily protein. | Major facilitator superfamily protein. | 0.622 |
CDG12227.1 | emrA-2 | SMDB11_1651 | SMDB11_3133 | Major facilitator superfamily protein. | Multidrug resistance protein A. | 0.527 |
CDG14781.1 | CDG12227.1 | SMDB11_4222 | SMDB11_1651 | Putative secretion protein. | Major facilitator superfamily protein. | 0.505 |
CDG14919.1 | CDG12227.1 | SMDB11_4359 | SMDB11_1651 | Major facilitator superfamily protein. | Major facilitator superfamily protein. | 0.622 |
emrA-2 | CDG12227.1 | SMDB11_3133 | SMDB11_1651 | Multidrug resistance protein A. | Major facilitator superfamily protein. | 0.527 |