Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG12720.1 | CDG12721.1 | SMDB11_2145 | SMDB11_2146 | Glycosyl transferase. | Glycosyl transferase. | 0.906 |
CDG12720.1 | CDG12725.1 | SMDB11_2145 | SMDB11_2150 | Glycosyl transferase. | Tyrosine-protein kinase. | 0.836 |
CDG12720.1 | CDG12726.1 | SMDB11_2145 | SMDB11_2151 | Glycosyl transferase. | Putative polysaccharide export protein. | 0.736 |
CDG12720.1 | SMDB11_0857 | SMDB11_2145 | SMDB11_0857 | Glycosyl transferase. | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | 0.737 |
CDG12720.1 | spsA | SMDB11_2145 | SMDB11_2144 | Glycosyl transferase. | Glycosyl transferase. | 0.908 |
CDG12720.1 | wzx | SMDB11_2145 | SMDB11_2149 | Glycosyl transferase. | Oligosaccharide repeat unit exporter. | 0.834 |
CDG12721.1 | CDG12720.1 | SMDB11_2146 | SMDB11_2145 | Glycosyl transferase. | Glycosyl transferase. | 0.906 |
CDG12721.1 | CDG12725.1 | SMDB11_2146 | SMDB11_2150 | Glycosyl transferase. | Tyrosine-protein kinase. | 0.840 |
CDG12721.1 | CDG12726.1 | SMDB11_2146 | SMDB11_2151 | Glycosyl transferase. | Putative polysaccharide export protein. | 0.762 |
CDG12721.1 | SMDB11_0857 | SMDB11_2146 | SMDB11_0857 | Glycosyl transferase. | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | 0.713 |
CDG12721.1 | spsA | SMDB11_2146 | SMDB11_2144 | Glycosyl transferase. | Glycosyl transferase. | 0.840 |
CDG12721.1 | wzx | SMDB11_2146 | SMDB11_2149 | Glycosyl transferase. | Oligosaccharide repeat unit exporter. | 0.796 |
CDG12725.1 | CDG12720.1 | SMDB11_2150 | SMDB11_2145 | Tyrosine-protein kinase. | Glycosyl transferase. | 0.836 |
CDG12725.1 | CDG12721.1 | SMDB11_2150 | SMDB11_2146 | Tyrosine-protein kinase. | Glycosyl transferase. | 0.840 |
CDG12725.1 | CDG12726.1 | SMDB11_2150 | SMDB11_2151 | Tyrosine-protein kinase. | Putative polysaccharide export protein. | 0.996 |
CDG12725.1 | SMDB11_0857 | SMDB11_2150 | SMDB11_0857 | Tyrosine-protein kinase. | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | 0.993 |
CDG12725.1 | spsA | SMDB11_2150 | SMDB11_2144 | Tyrosine-protein kinase. | Glycosyl transferase. | 0.861 |
CDG12725.1 | wza | SMDB11_2150 | SMDB11_0850 | Tyrosine-protein kinase. | Lipoprotein required for capsular polysaccharide translocation through the outer membrane. | 0.990 |
CDG12725.1 | wzc | SMDB11_2150 | SMDB11_0852 | Tyrosine-protein kinase. | Tyrosine kinase. | 0.948 |
CDG12725.1 | wzx | SMDB11_2150 | SMDB11_2149 | Tyrosine-protein kinase. | Oligosaccharide repeat unit exporter. | 0.910 |
page 1 of 4