STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDG12726.1Putative polysaccharide export protein. (377 aa)    
Predicted Functional Partners:
CDG12725.1
Tyrosine-protein kinase.
 
 
 0.996
wzc
Tyrosine kinase.
 
 
 0.990
SMDB11_0857
Undecaprenyl-phosphate galactose phosphotransferase WbaP.
 
  
 0.975
wza
Lipoprotein required for capsular polysaccharide translocation through the outer membrane.
  
  
 
0.901
spsA
Glycosyl transferase.
 
  
 0.783
CDG12721.1
Glycosyl transferase.
  
  
 0.762
wzx
Oligosaccharide repeat unit exporter.
  
  
 0.738
CDG12720.1
Glycosyl transferase.
  
  
 0.736
wzt
Exopolysaccharide ABC-2 type transporter,ATP-binding component.
  
  
 0.724
wzm
Exopolysaccharide ABC-2 type transporter,membrane component.
  
  
 0.718
Your Current Organism:
Serratia marcescens
NCBI taxonomy Id: 273526
Other names: S. marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens str. Db11, Serratia marcescens subsp. marcescens strain Db11
Server load: low (20%) [HD]