Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG12892.1 | CDG12893.1 | SMDB11_2317A | SMDB11_2319 | Hypothetical protein. | Hypothetical protein. | 0.524 |
CDG12892.1 | CDG12894.1 | SMDB11_2317A | SMDB11_2320 | Hypothetical protein. | Putative membrane protein. | 0.524 |
CDG12893.1 | CDG12892.1 | SMDB11_2319 | SMDB11_2317A | Hypothetical protein. | Hypothetical protein. | 0.524 |
CDG12893.1 | CDG12894.1 | SMDB11_2319 | SMDB11_2320 | Hypothetical protein. | Putative membrane protein. | 0.955 |
CDG12894.1 | CDG12892.1 | SMDB11_2320 | SMDB11_2317A | Putative membrane protein. | Hypothetical protein. | 0.524 |
CDG12894.1 | CDG12893.1 | SMDB11_2320 | SMDB11_2319 | Putative membrane protein. | Hypothetical protein. | 0.955 |
CDG12894.1 | bsaA_1 | SMDB11_2320 | SMDB11_1445 | Putative membrane protein. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.584 |
CDG12894.1 | btuE | SMDB11_2320 | SMDB11_1426 | Putative membrane protein. | Putative glutathione peroxidase/vitamin B12transport periplasmic protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.584 |
CDG12894.1 | ccmG | SMDB11_2320 | SMDB11_2778 | Putative membrane protein. | Periplasmic thioredoxin CcmG of cytochrome C biogenesis. | 0.779 |
CDG12894.1 | scsD | SMDB11_2320 | SMDB11_2749 | Putative membrane protein. | Suppressor for copper-sensitivity D. | 0.779 |
bsaA_1 | CDG12894.1 | SMDB11_1445 | SMDB11_2320 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Putative membrane protein. | 0.584 |
bsaA_1 | btuE | SMDB11_1445 | SMDB11_1426 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Putative glutathione peroxidase/vitamin B12transport periplasmic protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.907 |
bsaA_1 | ccmG | SMDB11_1445 | SMDB11_2778 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Periplasmic thioredoxin CcmG of cytochrome C biogenesis. | 0.423 |
bsaA_1 | scsD | SMDB11_1445 | SMDB11_2749 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Suppressor for copper-sensitivity D. | 0.423 |
btuE | CDG12894.1 | SMDB11_1426 | SMDB11_2320 | Putative glutathione peroxidase/vitamin B12transport periplasmic protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | Putative membrane protein. | 0.584 |
btuE | bsaA_1 | SMDB11_1426 | SMDB11_1445 | Putative glutathione peroxidase/vitamin B12transport periplasmic protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.907 |
btuE | ccmG | SMDB11_1426 | SMDB11_2778 | Putative glutathione peroxidase/vitamin B12transport periplasmic protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | Periplasmic thioredoxin CcmG of cytochrome C biogenesis. | 0.423 |
btuE | scsD | SMDB11_1426 | SMDB11_2749 | Putative glutathione peroxidase/vitamin B12transport periplasmic protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | Suppressor for copper-sensitivity D. | 0.423 |
ccmG | CDG12894.1 | SMDB11_2778 | SMDB11_2320 | Periplasmic thioredoxin CcmG of cytochrome C biogenesis. | Putative membrane protein. | 0.779 |
ccmG | bsaA_1 | SMDB11_2778 | SMDB11_1445 | Periplasmic thioredoxin CcmG of cytochrome C biogenesis. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.423 |
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