Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG12958.1 | CDG12959.1 | SMDB11_2386 | SMDB11_2387 | Glyceraldehyde-3-phosphate dehydrogenase A; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | AraC-family transcriptional regulator. | 0.561 |
CDG12958.1 | CDG12960.1 | SMDB11_2386 | SMDB11_2388 | Glyceraldehyde-3-phosphate dehydrogenase A; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.623 |
CDG12958.1 | CDG12961.1 | SMDB11_2386 | SMDB11_2389 | Glyceraldehyde-3-phosphate dehydrogenase A; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Putative monooxygenase. | 0.552 |
CDG12959.1 | CDG12958.1 | SMDB11_2387 | SMDB11_2386 | AraC-family transcriptional regulator. | Glyceraldehyde-3-phosphate dehydrogenase A; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.561 |
CDG12959.1 | CDG12960.1 | SMDB11_2387 | SMDB11_2388 | AraC-family transcriptional regulator. | Hypothetical protein. | 0.775 |
CDG12959.1 | CDG12961.1 | SMDB11_2387 | SMDB11_2389 | AraC-family transcriptional regulator. | Putative monooxygenase. | 0.780 |
CDG12959.1 | CDG14764.1 | SMDB11_2387 | SMDB11_4204 | AraC-family transcriptional regulator. | Putative isochorismatase. | 0.418 |
CDG12960.1 | CDG12958.1 | SMDB11_2388 | SMDB11_2386 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase A; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.623 |
CDG12960.1 | CDG12959.1 | SMDB11_2388 | SMDB11_2387 | Hypothetical protein. | AraC-family transcriptional regulator. | 0.775 |
CDG12960.1 | CDG12961.1 | SMDB11_2388 | SMDB11_2389 | Hypothetical protein. | Putative monooxygenase. | 0.752 |
CDG12961.1 | CDG12958.1 | SMDB11_2389 | SMDB11_2386 | Putative monooxygenase. | Glyceraldehyde-3-phosphate dehydrogenase A; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.552 |
CDG12961.1 | CDG12959.1 | SMDB11_2389 | SMDB11_2387 | Putative monooxygenase. | AraC-family transcriptional regulator. | 0.780 |
CDG12961.1 | CDG12960.1 | SMDB11_2389 | SMDB11_2388 | Putative monooxygenase. | Hypothetical protein. | 0.752 |
CDG14764.1 | CDG12959.1 | SMDB11_4204 | SMDB11_2387 | Putative isochorismatase. | AraC-family transcriptional regulator. | 0.418 |