STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDG13075.1AMP-binding protein. (579 aa)    
Predicted Functional Partners:
CDG13076.1
Hypothetical protein.
 
 
 0.949
CDG15165.1
Adenylation domain-containing protein.
 
 0.946
entF
Enterobactin synthase subunit F.
 
0.944
CDG12864.1
Non-ribosomal peptide synthetase.
0.942
CDG13077.1
Putative acyl carrier protein.
 
 
 0.936
CDG12304.1
Siderophore systhetase CbsF homolog, containing non-ribosomal peptide synthetase modules.
 
0.904
CDG13078.1
Putative aminotransferase.
 
 0.902
CDG12144.1
Putative bacteriocin biosynthesis protein.
 
 0.878
CDG14963.1
Putative non-ribosomal peptide synthetase.
 
0.872
CDG13074.1
Hypothetical protein.
  
     0.767
Your Current Organism:
Serratia marcescens
NCBI taxonomy Id: 273526
Other names: S. marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens Db11, Serratia marcescens subsp. marcescens str. Db11, Serratia marcescens subsp. marcescens strain Db11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.