Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG12725.1 | CDG12864.1 | SMDB11_2150 | SMDB11_2289 | Tyrosine-protein kinase. | Non-ribosomal peptide synthetase. | 0.402 |
CDG12725.1 | CDG13154.1 | SMDB11_2150 | SMDB11_2588 | Tyrosine-protein kinase. | Putative phage-encoded acetyltransferase. | 0.480 |
CDG12725.1 | SMDB11_0857 | SMDB11_2150 | SMDB11_0857 | Tyrosine-protein kinase. | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | 0.993 |
CDG12725.1 | wzc | SMDB11_2150 | SMDB11_0852 | Tyrosine-protein kinase. | Tyrosine kinase. | 0.948 |
CDG12864.1 | CDG12725.1 | SMDB11_2289 | SMDB11_2150 | Non-ribosomal peptide synthetase. | Tyrosine-protein kinase. | 0.402 |
CDG12864.1 | CDG13154.1 | SMDB11_2289 | SMDB11_2588 | Non-ribosomal peptide synthetase. | Putative phage-encoded acetyltransferase. | 0.433 |
CDG12864.1 | SMDB11_0857 | SMDB11_2289 | SMDB11_0857 | Non-ribosomal peptide synthetase. | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | 0.576 |
CDG12864.1 | wzc | SMDB11_2289 | SMDB11_0852 | Non-ribosomal peptide synthetase. | Tyrosine kinase. | 0.402 |
CDG13153.1 | CDG13154.1 | SMDB11_2587 | SMDB11_2588 | Phage protein. | Putative phage-encoded acetyltransferase. | 0.603 |
CDG13154.1 | CDG12725.1 | SMDB11_2588 | SMDB11_2150 | Putative phage-encoded acetyltransferase. | Tyrosine-protein kinase. | 0.480 |
CDG13154.1 | CDG12864.1 | SMDB11_2588 | SMDB11_2289 | Putative phage-encoded acetyltransferase. | Non-ribosomal peptide synthetase. | 0.433 |
CDG13154.1 | CDG13153.1 | SMDB11_2588 | SMDB11_2587 | Putative phage-encoded acetyltransferase. | Phage protein. | 0.603 |
CDG13154.1 | SMDB11_0857 | SMDB11_2588 | SMDB11_0857 | Putative phage-encoded acetyltransferase. | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | 0.563 |
CDG13154.1 | wzc | SMDB11_2588 | SMDB11_0852 | Putative phage-encoded acetyltransferase. | Tyrosine kinase. | 0.480 |
CDG13154.1 | wzt | SMDB11_2588 | SMDB11_0874 | Putative phage-encoded acetyltransferase. | Exopolysaccharide ABC-2 type transporter,ATP-binding component. | 0.431 |
SMDB11_0857 | CDG12725.1 | SMDB11_0857 | SMDB11_2150 | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | Tyrosine-protein kinase. | 0.993 |
SMDB11_0857 | CDG12864.1 | SMDB11_0857 | SMDB11_2289 | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | Non-ribosomal peptide synthetase. | 0.576 |
SMDB11_0857 | CDG13154.1 | SMDB11_0857 | SMDB11_2588 | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | Putative phage-encoded acetyltransferase. | 0.563 |
SMDB11_0857 | wzc | SMDB11_0857 | SMDB11_0852 | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | Tyrosine kinase. | 0.995 |
SMDB11_0857 | wzt | SMDB11_0857 | SMDB11_0874 | Undecaprenyl-phosphate galactose phosphotransferase WbaP. | Exopolysaccharide ABC-2 type transporter,ATP-binding component. | 0.535 |
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