Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDG11102.1 | CDG11764.1 | SMDB11_0517 | SMDB11_1187 | Hypothetical protein. | Putative lipoprotein. | 0.742 |
CDG11102.1 | CDG12637.1 | SMDB11_0517 | SMDB11_2062 | Hypothetical protein. | Hypothetical protein. | 0.771 |
CDG11102.1 | CDG13145.1 | SMDB11_0517 | SMDB11_2579 | Hypothetical protein. | Hypothetical protein. | 0.767 |
CDG11102.1 | CDG15063.1 | SMDB11_0517 | SMDB11_4502 | Hypothetical protein. | Hypothetical protein. | 0.773 |
CDG11102.1 | atpI | SMDB11_0517 | SMDB11_4123 | Hypothetical protein. | ATP synthase, membrane-bound accessory subunit. | 0.764 |
CDG11102.1 | cpxP | SMDB11_0517 | SMDB11_4033 | Hypothetical protein. | Extracytoplasmic stress protein. | 0.770 |
CDG11102.1 | pspG | SMDB11_0517 | SMDB11_3706 | Hypothetical protein. | Phage shock protein G. | 0.714 |
CDG11102.1 | tomB | SMDB11_0517 | SMDB11_0363 | Hypothetical protein. | Hypothetical protein. | 0.741 |
CDG11102.1 | tus | SMDB11_0517 | SMDB11_1541 | Hypothetical protein. | Putative DNA replication terminus site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family. | 0.575 |
CDG11102.1 | uspB | SMDB11_0517 | SMDB11_3936 | Hypothetical protein. | Universal stress protein B. | 0.759 |
CDG11764.1 | CDG11102.1 | SMDB11_1187 | SMDB11_0517 | Putative lipoprotein. | Hypothetical protein. | 0.742 |
CDG11764.1 | CDG12637.1 | SMDB11_1187 | SMDB11_2062 | Putative lipoprotein. | Hypothetical protein. | 0.612 |
CDG11764.1 | CDG13145.1 | SMDB11_1187 | SMDB11_2579 | Putative lipoprotein. | Hypothetical protein. | 0.772 |
CDG11764.1 | CDG15063.1 | SMDB11_1187 | SMDB11_4502 | Putative lipoprotein. | Hypothetical protein. | 0.757 |
CDG11764.1 | atpI | SMDB11_1187 | SMDB11_4123 | Putative lipoprotein. | ATP synthase, membrane-bound accessory subunit. | 0.736 |
CDG11764.1 | cpxP | SMDB11_1187 | SMDB11_4033 | Putative lipoprotein. | Extracytoplasmic stress protein. | 0.753 |
CDG11764.1 | pspG | SMDB11_1187 | SMDB11_3706 | Putative lipoprotein. | Phage shock protein G. | 0.744 |
CDG11764.1 | tomB | SMDB11_1187 | SMDB11_0363 | Putative lipoprotein. | Hypothetical protein. | 0.774 |
CDG11764.1 | tus | SMDB11_1187 | SMDB11_1541 | Putative lipoprotein. | Putative DNA replication terminus site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family. | 0.774 |
CDG11764.1 | uspB | SMDB11_1187 | SMDB11_3936 | Putative lipoprotein. | Universal stress protein B. | 0.770 |
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