Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BglF | CelA | BW34_00774 | BW34_02408 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Phosphotransferase system cellobiose-specific component IIB. | 0.801 |
BglF | FruA | BW34_00774 | BW34_00535 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | PTS system, Fru family, IIC component. | 0.998 |
BglF | GlpR | BW34_00774 | BW34_00537 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Regulatory protein DeoR. | 0.764 |
BglF | LicR | BW34_00774 | BW34_02407 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Transcriptional antiterminator. | 0.946 |
BglF | MtlA | BW34_00774 | BW34_02411 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Putative EIICBA-Mtl. | 0.769 |
BglF | PfkB | BW34_00774 | BW34_00536 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.817 |
BglF | PtsH_1 | BW34_00774 | BW34_00534 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Phosphocarrier protein. | 0.995 |
BglF | PtsH_2 | BW34_00774 | BW34_02409 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Phosphocarrier protein. | 0.995 |
BglF | mtlD_1 | BW34_00774 | BW34_02412 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein. | 0.820 |
BglF | ptsI | BW34_00774 | BW34_02410 | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.997 |
CelA | BglF | BW34_02408 | BW34_00774 | Phosphotransferase system cellobiose-specific component IIB. | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | 0.801 |
CelA | LicR | BW34_02408 | BW34_02407 | Phosphotransferase system cellobiose-specific component IIB. | Transcriptional antiterminator. | 0.958 |
CelA | MtlA | BW34_02408 | BW34_02411 | Phosphotransferase system cellobiose-specific component IIB. | Putative EIICBA-Mtl. | 0.892 |
CelA | PfkB | BW34_02408 | BW34_00536 | Phosphotransferase system cellobiose-specific component IIB. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.660 |
CelA | PtsH_1 | BW34_02408 | BW34_00534 | Phosphotransferase system cellobiose-specific component IIB. | Phosphocarrier protein. | 0.911 |
CelA | PtsH_2 | BW34_02408 | BW34_02409 | Phosphotransferase system cellobiose-specific component IIB. | Phosphocarrier protein. | 0.979 |
CelA | mtlD_1 | BW34_02408 | BW34_02412 | Phosphotransferase system cellobiose-specific component IIB. | Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein. | 0.715 |
CelA | ptsI | BW34_02408 | BW34_02410 | Phosphotransferase system cellobiose-specific component IIB. | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.814 |
FruA | BglF | BW34_00535 | BW34_00774 | PTS system, Fru family, IIC component. | Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component. | 0.998 |
FruA | GlpR | BW34_00535 | BW34_00537 | PTS system, Fru family, IIC component. | Regulatory protein DeoR. | 0.994 |
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