STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlmU_1Sugar nucleotidyltransferase. (229 aa)    
Predicted Functional Partners:
BW34_00612
Conserved membrane protein.
 
     0.710
BW34_02377
Putative O-antigen ligase.
 
     0.695
BW34_00613
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
       0.630
BW34_02395
Putative permease.
  
     0.553
BW34_00614
Acyltransferase.
 
     0.541
TarF_1
Glycosyl/glycerophosphate transferase.
 
  
 0.533
BW34_00616
Glycosyltransferase.
 
     0.496
BW34_00609
Putative integral membrane transport protein.
       0.482
BW34_00610
ABC transporter related protein.
       0.479
TarF_2
Putative glycosyl/glycerophosphate transferase.
 
  
 0.475
Your Current Organism:
Microbacterium oleivorans
NCBI taxonomy Id: 273677
Other names: DSM 16091, JCM 14341, M. oleivorans, Microbacterium oleivorans Schippers et al. 2005, NBRC 103075, NCIMB 14003, strain BAS69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.