STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW34_01933Hypothetical protein. (220 aa)    
Predicted Functional Partners:
Csp
Putative cold shock protein.
       0.845
BW34_01930
Putative DNA-binding protein.
 
     0.786
BW34_01406
Putative membrane protein.
  
     0.641
BW34_01931
Multidrug ABC transporter ATP-binding protein/permease protein.
       0.596
BW34_00307
Hypothetical protein.
  
     0.586
BW34_01929
DNA excision repair protein ERCC-3.
       0.583
BW34_01691
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component.
  
     0.559
BW34_00494
Putative oxidoreductase.
  
     0.549
BW34_01288
Carbamoylphosphate synthase, large chain.
  
     0.533
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.532
Your Current Organism:
Microbacterium oleivorans
NCBI taxonomy Id: 273677
Other names: DSM 16091, JCM 14341, M. oleivorans, Microbacterium oleivorans Schippers et al. 2005, NBRC 103075, NCIMB 14003, strain BAS69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.