STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XylH_1Sugar ABC transporter permease protein. (410 aa)    
Predicted Functional Partners:
ChvE
Sugar ABC transporter substrate-binding protein.
  
 0.941
XylG_1
Sugar ABC transporter ATP-binding protein.
  
 0.941
XylF_1
Putative D-xylose ABC transporter, D-xylose-binding protein.
  
 0.823
XylF_2
Putative D-xylose ABC transporter, D-xylose-binding protein.
  
 0.792
BW34_02092
Hypothetical protein.
       0.773
MglA_1
ABC-type sugar transport system, ATPase component.
  
 0.649
YtfQ_1
Sugar ABC transporter substrate-binding protein.
  
 0.648
MglA_2
ABC-type sugar transport system, ATPase component.
  
 0.604
BW34_02093
Membrane protein.
       0.539
MglA_3
ABC-type sugar transport system, ATPase component.
  
 0.538
Your Current Organism:
Microbacterium oleivorans
NCBI taxonomy Id: 273677
Other names: DSM 16091, JCM 14341, M. oleivorans, Microbacterium oleivorans Schippers et al. 2005, NBRC 103075, NCIMB 14003, strain BAS69
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