STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LpdA_2Dihydrolipoamide dehydrogenase. (486 aa)    
Predicted Functional Partners:
Kgd
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component.
  
 0.999
sucB
Dihydrolipoamide acetyltransferase.
 0.916
BkdB_2
Pyruvate dehydrogenase E1 component subunit beta.
 
 0.894
BkdB_1
2-oxoisovalerate dehydrogenase subunit beta.
 
 0.891
PdhC_1
Catalytic domain-containing protein.
 0.863
pdhC
Pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide acyltransferase (E2) component.
 0.857
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
  
 0.809
pdhA
Pyruvate/2-oxoglutarate dehydrogenase complex-containing protein.
 
 
 0.761
pdhA-2
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit.
 
 
 0.753
BW34_02402
FG-GAP repeat domain-containing protein.
       0.718
Your Current Organism:
Microbacterium oleivorans
NCBI taxonomy Id: 273677
Other names: DSM 16091, JCM 14341, M. oleivorans, Microbacterium oleivorans Schippers et al. 2005, NBRC 103075, NCIMB 14003, strain BAS69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.