STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW34_02419ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family. (428 aa)    
Predicted Functional Partners:
BW34_02420
ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
0.997
RbsA_1
ABC transporter.
 
 0.997
TmpC
Membrane protein.
 
 
 0.990
Cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.802
DeoA
Thymidine phosphorylase.
     
 0.751
Add
Adenosine deaminase.
       0.654
MglA_2
ABC-type sugar transport system, ATPase component.
     0.496
MglA_3
ABC-type sugar transport system, ATPase component.
     0.485
RfbM
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
       0.447
NeuA
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family.
       0.418
Your Current Organism:
Microbacterium oleivorans
NCBI taxonomy Id: 273677
Other names: DSM 16091, JCM 14341, M. oleivorans, Microbacterium oleivorans Schippers et al. 2005, NBRC 103075, NCIMB 14003, strain BAS69
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