STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BW34_024732-polyprenylphenol hydroxylase. (101 aa)    
Predicted Functional Partners:
BW34_01371
Transposase.
  
     0.705
BW34_01752
S-adenosylmethionine:tRNA-ribosyltransferase- isomerase.
 
     0.686
BW34_00572
Hypothetical protein.
   
 
 0.611
wcoO
Membrane protein.
  
 
 0.575
YhcR_3
LPXTG-motif cell wall anchor domain protein.
   
 
 0.567
BW34_01357
Putative glycosyltransferase.
 
     0.549
BW34_02635
Putative exported protein precursor.
  
     0.547
BW34_01354
Putative glycosyltransferase; Overlaps another CDS with the same product name.
  
     0.526
BW34_02472
Hypothetical protein.
       0.482
BW34_01753
Hypothetical protein.
 
     0.453
Your Current Organism:
Microbacterium oleivorans
NCBI taxonomy Id: 273677
Other names: DSM 16091, JCM 14341, M. oleivorans, Microbacterium oleivorans Schippers et al. 2005, NBRC 103075, NCIMB 14003, strain BAS69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.