STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaD3,4-dihydroxyphenylacetate 2,3-dioxygenase. (387 aa)    
Predicted Functional Partners:
MobA_3
Phenol 2-monooxygenase.
 
  
 0.971
HpcG
2-oxo-hept-3-ene-1,7-dioate hydratase.
 
  
 0.958
BphF
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.941
hpaG
4-hydroxyphenylacetate degradation bifunctionalisomerase/decarboxylase.
 
  
 0.932
CatE
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
 0.908
McbR
Transcriptional regulator.
 
     0.906
hpaE
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.903
Xsc
Acetolactate synthase; Belongs to the TPP enzyme family.
  
   
 0.745
YhjE_3
Putative transporter.
 
     0.591
sdhC
Succinate dehydrogenase, cytochrome b556 subunit.
   
  
 0.574
Your Current Organism:
Microbacterium oleivorans
NCBI taxonomy Id: 273677
Other names: DSM 16091, JCM 14341, M. oleivorans, Microbacterium oleivorans Schippers et al. 2005, NBRC 103075, NCIMB 14003, strain BAS69
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