Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BW34_00232 | BW34_00444 | BW34_00232 | BW34_00444 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.438 |
BW34_00232 | BW34_00520 | BW34_00232 | BW34_00520 | DNA polymerase III, delta subunit. | Secreted protein. | 0.534 |
BW34_00232 | BW34_02162 | BW34_00232 | BW34_02162 | DNA polymerase III, delta subunit. | Septum formation initiator. | 0.553 |
BW34_00232 | BW34_02254 | BW34_00232 | BW34_02254 | DNA polymerase III, delta subunit. | Aminoglycoside phosphotransferase. | 0.719 |
BW34_00232 | BW34_02598 | BW34_00232 | BW34_02598 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.562 |
BW34_00232 | BW34_02711 | BW34_00232 | BW34_02711 | DNA polymerase III, delta subunit. | DNA-directed RNA polymerase beta subunit. | 0.484 |
BW34_00232 | BW34_02813 | BW34_00232 | BW34_02813 | DNA polymerase III, delta subunit. | Hypothetical protein; Putative transcription termination factor. | 0.718 |
BW34_00444 | BW34_00232 | BW34_00444 | BW34_00232 | Hypothetical protein. | DNA polymerase III, delta subunit. | 0.438 |
BW34_00444 | BW34_00520 | BW34_00444 | BW34_00520 | Hypothetical protein. | Secreted protein. | 0.548 |
BW34_00444 | BW34_02254 | BW34_00444 | BW34_02254 | Hypothetical protein. | Aminoglycoside phosphotransferase. | 0.509 |
BW34_00444 | BW34_02598 | BW34_00444 | BW34_02598 | Hypothetical protein. | Hypothetical protein. | 0.667 |
BW34_00444 | BW34_02711 | BW34_00444 | BW34_02711 | Hypothetical protein. | DNA-directed RNA polymerase beta subunit. | 0.632 |
BW34_00444 | BW34_02813 | BW34_00444 | BW34_02813 | Hypothetical protein. | Hypothetical protein; Putative transcription termination factor. | 0.622 |
BW34_00520 | BW34_00232 | BW34_00520 | BW34_00232 | Secreted protein. | DNA polymerase III, delta subunit. | 0.534 |
BW34_00520 | BW34_00444 | BW34_00520 | BW34_00444 | Secreted protein. | Hypothetical protein. | 0.548 |
BW34_00520 | BW34_02254 | BW34_00520 | BW34_02254 | Secreted protein. | Aminoglycoside phosphotransferase. | 0.727 |
BW34_00520 | BW34_02598 | BW34_00520 | BW34_02598 | Secreted protein. | Hypothetical protein. | 0.683 |
BW34_00520 | BW34_02711 | BW34_00520 | BW34_02711 | Secreted protein. | DNA-directed RNA polymerase beta subunit. | 0.461 |
BW34_00520 | BW34_02813 | BW34_00520 | BW34_02813 | Secreted protein. | Hypothetical protein; Putative transcription termination factor. | 0.713 |
BW34_02162 | BW34_00232 | BW34_02162 | BW34_00232 | Septum formation initiator. | DNA polymerase III, delta subunit. | 0.553 |
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