STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsKDNA translocase FtsK. (659 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein FtsQ; Essential cell division protein.
   
 
 0.768
spo0C
Chromosome-partitioning protein Spo0J; Belongs to the ParB family.
  
   
 0.681
KJL47109.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
    
 
 0.669
KJL49456.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
    
 
 0.662
KJL47108.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
    
 
 0.662
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.605
KJL47094.1
Hypothetical protein.
  
 
 0.597
KJL47707.1
Hypothetical protein.
  
 
 0.597
KJL48431.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
    
   0.574
KJL47710.1
Hypothetical protein.
    
   0.574
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.