Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
araQ_1 | lacF_1 | RS84_00058 | RS84_00057 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.996 |
araQ_1 | msmE_1 | RS84_00058 | RS84_00056 | L-arabinose transport system permease protein AraQ. | Multiple sugar-binding protein precursor. | 0.991 |
araQ_1 | sugC_1 | RS84_00058 | RS84_00147 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.955 |
araQ_1 | sugC_2 | RS84_00058 | RS84_00898 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.681 |
araQ_2 | lacF_1 | RS84_00758 | RS84_00057 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.601 |
araQ_2 | msmE_1 | RS84_00758 | RS84_00056 | L-arabinose transport system permease protein AraQ. | Multiple sugar-binding protein precursor. | 0.493 |
araQ_2 | sugC_1 | RS84_00758 | RS84_00147 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.858 |
araQ_2 | sugC_2 | RS84_00758 | RS84_00898 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.762 |
araQ_3 | lacF_1 | RS84_00787 | RS84_00057 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.626 |
araQ_3 | msmE_1 | RS84_00787 | RS84_00056 | L-arabinose transport system permease protein AraQ. | Multiple sugar-binding protein precursor. | 0.493 |
araQ_3 | sugC_1 | RS84_00787 | RS84_00147 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.811 |
araQ_3 | sugC_2 | RS84_00787 | RS84_00898 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.732 |
araQ_4 | araQ_5 | RS84_00828 | RS84_00832 | L-arabinose transport system permease protein AraQ. | L-arabinose transport system permease protein AraQ. | 0.495 |
araQ_4 | lacF_1 | RS84_00828 | RS84_00057 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.681 |
araQ_4 | msmE_1 | RS84_00828 | RS84_00056 | L-arabinose transport system permease protein AraQ. | Multiple sugar-binding protein precursor. | 0.493 |
araQ_4 | sugC_1 | RS84_00828 | RS84_00147 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.853 |
araQ_4 | sugC_2 | RS84_00828 | RS84_00898 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.735 |
araQ_5 | araQ_4 | RS84_00832 | RS84_00828 | L-arabinose transport system permease protein AraQ. | L-arabinose transport system permease protein AraQ. | 0.495 |
araQ_5 | lacF_1 | RS84_00832 | RS84_00057 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.555 |
araQ_5 | msmE_1 | RS84_00832 | RS84_00056 | L-arabinose transport system permease protein AraQ. | Multiple sugar-binding protein precursor. | 0.493 |
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