STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoBPhosphate regulon transcriptional regulatory protein PhoB. (226 aa)    
Predicted Functional Partners:
senX3
Signal-transduction histidine kinase senX3.
 
 0.872
arlS
Signal transduction histidine-protein kinase ArlS.
  
  0.849
tcrY_2
Putative sensor histidine kinase TcrY.
 
 0.848
tcrY_1
Putative sensor histidine kinase TcrY.
 
 0.833
cusS
Sensor kinase CusS.
 
 0.811
mtrB
Sensor histidine kinase MtrB.
 
 0.788
kdpD
Sensor protein KdpD.
  
 0.777
yycG
Sensor histidine kinase YycG.
  
 0.754
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
     
 0.752
ndx1
Diadenosine hexaphosphate hydrolase.
    
  0.744
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.