STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL49459.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
dehH1
Haloacetate dehalogenase H-1.
 
     0.818
tcrX_1
Putative transcriptional regulatory protein TcrX.
  
    0.599
betI_13
HTH-type transcriptional regulator BetI.
  
     0.536
tcrY_1
Putative sensor histidine kinase TcrY.
       0.510
KJL48549.1
YaeQ protein.
   
    0.461
KJL48346.1
SnoaL-like domain protein.
  
     0.441
KJL47618.1
Hemerythrin HHE cation binding domain protein.
  
     0.415
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.