Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46321.1 | aqpZ | RS84_02952 | RS84_01596 | Hypothetical protein. | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.591 |
KJL46321.1 | cbpA | RS84_02952 | RS84_01534 | Hypothetical protein. | Curved DNA-binding protein. | 0.827 |
KJL46321.1 | glpF | RS84_02952 | RS84_03146 | Hypothetical protein. | Putative glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.591 |
KJL46321.1 | gpr_2 | RS84_02952 | RS84_00301 | Hypothetical protein. | L-glyceraldehyde 3-phosphate reductase. | 0.483 |
KJL46321.1 | rsmA | RS84_02952 | RS84_00300 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.497 |
KJL49191.1 | bacE | RS84_00303 | RS84_00299 | Hypothetical protein. | Putative bacilysin exporter BacE. | 0.435 |
KJL49191.1 | gpr_2 | RS84_00303 | RS84_00301 | Hypothetical protein. | L-glyceraldehyde 3-phosphate reductase. | 0.581 |
KJL49191.1 | ispE | RS84_00303 | RS84_00302 | Hypothetical protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.581 |
KJL49191.1 | rsmA | RS84_00303 | RS84_00300 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.581 |
aqpZ | KJL46321.1 | RS84_01596 | RS84_02952 | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Hypothetical protein. | 0.591 |
aqpZ | cbpA | RS84_01596 | RS84_01534 | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Curved DNA-binding protein. | 0.661 |
aqpZ | cypB | RS84_01596 | RS84_01823 | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.591 |
aqpZ | glpF | RS84_01596 | RS84_03146 | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Putative glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.682 |
aqpZ | gpr_2 | RS84_01596 | RS84_00301 | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | L-glyceraldehyde 3-phosphate reductase. | 0.524 |
bacE | KJL49191.1 | RS84_00299 | RS84_00303 | Putative bacilysin exporter BacE. | Hypothetical protein. | 0.435 |
bacE | gpr_2 | RS84_00299 | RS84_00301 | Putative bacilysin exporter BacE. | L-glyceraldehyde 3-phosphate reductase. | 0.564 |
bacE | ispE | RS84_00299 | RS84_00302 | Putative bacilysin exporter BacE. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.564 |
bacE | rsmA | RS84_00299 | RS84_00300 | Putative bacilysin exporter BacE. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.564 |
cbpA | KJL46321.1 | RS84_01534 | RS84_02952 | Curved DNA-binding protein. | Hypothetical protein. | 0.827 |
cbpA | aqpZ | RS84_01534 | RS84_01596 | Curved DNA-binding protein. | Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.661 |
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