Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47759.1 | exoA | RS84_01387 | RS84_00347 | HhH-GPD superfamily base excision DNA repair protein. | Exodeoxyribonuclease. | 0.847 |
KJL47759.1 | mutY | RS84_01387 | RS84_03346 | HhH-GPD superfamily base excision DNA repair protein. | A/G-specific adenine glycosylase. | 0.582 |
KJL47759.1 | polA_2 | RS84_01387 | RS84_03006 | HhH-GPD superfamily base excision DNA repair protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.713 |
KJL47759.1 | ung | RS84_01387 | RS84_03430 | HhH-GPD superfamily base excision DNA repair protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.565 |
KJL47759.1 | xthA | RS84_01387 | RS84_01431 | HhH-GPD superfamily base excision DNA repair protein. | Exodeoxyribonuclease III. | 0.847 |
KJL49235.1 | exoA | RS84_00348 | RS84_00347 | Ribonuclease BN/unknown domain fusion protein. | Exodeoxyribonuclease. | 0.797 |
KJL49235.1 | sdhB | RS84_00348 | RS84_00349 | Ribonuclease BN/unknown domain fusion protein. | Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.550 |
KJL49510.1 | exoA | RS84_00223 | RS84_00347 | Hypothetical protein. | Exodeoxyribonuclease. | 0.732 |
KJL49510.1 | mutY | RS84_00223 | RS84_03346 | Hypothetical protein. | A/G-specific adenine glycosylase. | 0.605 |
KJL49510.1 | polA_2 | RS84_00223 | RS84_03006 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
KJL49510.1 | ung | RS84_00223 | RS84_03430 | Hypothetical protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.722 |
KJL49510.1 | xthA | RS84_00223 | RS84_01431 | Hypothetical protein. | Exodeoxyribonuclease III. | 0.732 |
dnaN | exoA | RS84_01792 | RS84_00347 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease. | 0.732 |
dnaN | mutY | RS84_01792 | RS84_03346 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | A/G-specific adenine glycosylase. | 0.605 |
dnaN | polA_2 | RS84_01792 | RS84_03006 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
dnaN | ung | RS84_01792 | RS84_03430 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.722 |
dnaN | xthA | RS84_01792 | RS84_01431 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III. | 0.763 |
exoA | KJL47759.1 | RS84_00347 | RS84_01387 | Exodeoxyribonuclease. | HhH-GPD superfamily base excision DNA repair protein. | 0.847 |
exoA | KJL49235.1 | RS84_00347 | RS84_00348 | Exodeoxyribonuclease. | Ribonuclease BN/unknown domain fusion protein. | 0.797 |
exoA | KJL49510.1 | RS84_00347 | RS84_00223 | Exodeoxyribonuclease. | Hypothetical protein. | 0.732 |
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