Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL49267.1 | KJL49268.1 | RS84_00380 | RS84_00381 | Hypothetical protein. | Hypothetical protein. | 0.952 |
KJL49267.1 | devR | RS84_00380 | RS84_01731 | Hypothetical protein. | Transcriptional regulatory protein DevR (DosR). | 0.413 |
KJL49267.1 | uhpA | RS84_00380 | RS84_00379 | Hypothetical protein. | Transcriptional regulatory protein UhpA. | 0.920 |
KJL49268.1 | KJL49267.1 | RS84_00381 | RS84_00380 | Hypothetical protein. | Hypothetical protein. | 0.952 |
KJL49268.1 | uhpA | RS84_00381 | RS84_00379 | Hypothetical protein. | Transcriptional regulatory protein UhpA. | 0.960 |
desK_1 | devR | RS84_00153 | RS84_01731 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DevR (DosR). | 0.795 |
desK_1 | liaS | RS84_00153 | RS84_01674 | Sensor histidine kinase DesK. | Sensor histidine kinase LiaS. | 0.688 |
desK_1 | nreB_1 | RS84_00153 | RS84_01269 | Sensor histidine kinase DesK. | Oxygen sensor histidine kinase NreB. | 0.709 |
desK_1 | uhpA | RS84_00153 | RS84_00379 | Sensor histidine kinase DesK. | Transcriptional regulatory protein UhpA. | 0.725 |
desK_3 | devR | RS84_01124 | RS84_01731 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DevR (DosR). | 0.857 |
desK_3 | uhpA | RS84_01124 | RS84_00379 | Sensor histidine kinase DesK. | Transcriptional regulatory protein UhpA. | 0.800 |
desK_4 | devR | RS84_01929 | RS84_01731 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DevR (DosR). | 0.859 |
desK_4 | uhpA | RS84_01929 | RS84_00379 | Sensor histidine kinase DesK. | Transcriptional regulatory protein UhpA. | 0.813 |
desK_6 | devR | RS84_02291 | RS84_01731 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DevR (DosR). | 0.807 |
desK_6 | liaS | RS84_02291 | RS84_01674 | Sensor histidine kinase DesK. | Sensor histidine kinase LiaS. | 0.727 |
desK_6 | uhpA | RS84_02291 | RS84_00379 | Sensor histidine kinase DesK. | Transcriptional regulatory protein UhpA. | 0.729 |
desK_8 | devR | RS84_02816 | RS84_01731 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DevR (DosR). | 0.833 |
desK_8 | uhpA | RS84_02816 | RS84_00379 | Sensor histidine kinase DesK. | Transcriptional regulatory protein UhpA. | 0.775 |
devR | KJL49267.1 | RS84_01731 | RS84_00380 | Transcriptional regulatory protein DevR (DosR). | Hypothetical protein. | 0.413 |
devR | desK_1 | RS84_01731 | RS84_00153 | Transcriptional regulatory protein DevR (DosR). | Sensor histidine kinase DesK. | 0.795 |
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