Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL45968.1 | KJL46047.1 | RS84_02587 | RS84_02667 | Hypothetical protein. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.771 |
KJL45968.1 | KJL46129.1 | RS84_02587 | RS84_02752 | Hypothetical protein. | Hypothetical protein. | 0.692 |
KJL45968.1 | KJL49277.1 | RS84_02587 | RS84_00390 | Hypothetical protein. | Hypothetical protein. | 0.696 |
KJL45968.1 | nucS | RS84_02587 | RS84_01855 | Hypothetical protein. | Endonuclease NucS; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.711 |
KJL45968.1 | pdtaS | RS84_02587 | RS84_03462 | Hypothetical protein. | Putative sensor histidine kinase pdtaS. | 0.524 |
KJL45968.1 | whiB | RS84_02587 | RS84_03493 | Hypothetical protein. | Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.836 |
KJL45968.1 | whiB1 | RS84_02587 | RS84_03461 | Hypothetical protein. | Transcriptional regulator WhiB1; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.772 |
KJL46047.1 | KJL45968.1 | RS84_02667 | RS84_02587 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Hypothetical protein. | 0.771 |
KJL46047.1 | KJL46129.1 | RS84_02667 | RS84_02752 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Hypothetical protein. | 0.469 |
KJL46047.1 | KJL47589.1 | RS84_02667 | RS84_02387 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Putative oxidoreductase. | 0.449 |
KJL46047.1 | KJL49277.1 | RS84_02667 | RS84_00390 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Hypothetical protein. | 0.662 |
KJL46047.1 | nucS | RS84_02667 | RS84_01855 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Endonuclease NucS; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.615 |
KJL46047.1 | pdtaS | RS84_02667 | RS84_03462 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Putative sensor histidine kinase pdtaS. | 0.413 |
KJL46047.1 | whiB | RS84_02667 | RS84_03493 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Transcriptional regulator WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.754 |
KJL46047.1 | whiB1 | RS84_02667 | RS84_03461 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Transcriptional regulator WhiB1; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.766 |
KJL46129.1 | KJL45968.1 | RS84_02752 | RS84_02587 | Hypothetical protein. | Hypothetical protein. | 0.692 |
KJL46129.1 | KJL46047.1 | RS84_02752 | RS84_02667 | Hypothetical protein. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.469 |
KJL46129.1 | KJL49277.1 | RS84_02752 | RS84_00390 | Hypothetical protein. | Hypothetical protein. | 0.593 |
KJL46129.1 | nucS | RS84_02752 | RS84_01855 | Hypothetical protein. | Endonuclease NucS; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.606 |
KJL46129.1 | pdtaS | RS84_02752 | RS84_03462 | Hypothetical protein. | Putative sensor histidine kinase pdtaS. | 0.504 |
page 1 of 4