STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL49283.1Putative oxidoreductase. (264 aa)    
Predicted Functional Partners:
KJL47357.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
  
 
  0.773
lvr_1
Levodione reductase.
  
 
  0.762
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
  
  0.752
gno_3
Gluconate 5-dehydrogenase.
  
 
  0.743
ycdF
Glucose 1-dehydrogenase 2.
  
 
  0.726
gno_1
Gluconate 5-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.676
xecE
2-(S)-hydroxypropyl-CoM dehydrogenase.
  
 
  0.669
bdcA
Cyclic-di-GMP-binding biofilm dispersal mediator protein.
  
 
  0.586
lvr_2
Levodione reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.569
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
  0.551
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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