Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL45932.1 | KJL48876.1 | RS84_02550 | RS84_00506 | Prephenate dehydrogenase. | Aspartate aminotransferase. | 0.901 |
KJL45932.1 | pheA | RS84_02550 | RS84_00751 | Prephenate dehydrogenase. | Prephenate dehydratase. | 0.986 |
KJL48876.1 | KJL45932.1 | RS84_00506 | RS84_02550 | Aspartate aminotransferase. | Prephenate dehydrogenase. | 0.901 |
KJL48876.1 | ald | RS84_00506 | RS84_00502 | Aspartate aminotransferase. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.898 |
KJL48876.1 | argG | RS84_00506 | RS84_01001 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.899 |
KJL48876.1 | ask | RS84_00506 | RS84_00082 | Aspartate aminotransferase. | Aspartokinase; Belongs to the aspartokinase family. | 0.909 |
KJL48876.1 | aspA | RS84_00506 | RS84_03331 | Aspartate aminotransferase. | Aspartate ammonia-lyase. | 0.897 |
KJL48876.1 | coaBC | RS84_00506 | RS84_01479 | Aspartate aminotransferase. | Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.902 |
KJL48876.1 | gltB_1 | RS84_00506 | RS84_02996 | Aspartate aminotransferase. | Glutamate synthase [NADPH] large chain. | 0.941 |
KJL48876.1 | kgd | RS84_00506 | RS84_03445 | Aspartate aminotransferase. | Multifunctional 2-oxoglutarate metabolism enzyme. | 0.901 |
KJL48876.1 | ldh2 | RS84_00506 | RS84_02850 | Aspartate aminotransferase. | L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.919 |
KJL48876.1 | pheA | RS84_00506 | RS84_00751 | Aspartate aminotransferase. | Prephenate dehydratase. | 0.891 |
ald | KJL48876.1 | RS84_00502 | RS84_00506 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Aspartate aminotransferase. | 0.898 |
ald | gltB_1 | RS84_00502 | RS84_02996 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Glutamate synthase [NADPH] large chain. | 0.718 |
argG | KJL48876.1 | RS84_01001 | RS84_00506 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Aspartate aminotransferase. | 0.899 |
argG | ask | RS84_01001 | RS84_00082 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Aspartokinase; Belongs to the aspartokinase family. | 0.907 |
argG | aspA | RS84_01001 | RS84_03331 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Aspartate ammonia-lyase. | 0.884 |
argG | gltB_1 | RS84_01001 | RS84_02996 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Glutamate synthase [NADPH] large chain. | 0.931 |
ask | KJL48876.1 | RS84_00082 | RS84_00506 | Aspartokinase; Belongs to the aspartokinase family. | Aspartate aminotransferase. | 0.909 |
ask | argG | RS84_00082 | RS84_01001 | Aspartokinase; Belongs to the aspartokinase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.907 |
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