STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL48960.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
moxC_2
Putative monooxygenase MoxC.
 
     0.821
ntaA_2
Nitrilotriacetate monooxygenase component A.
 
     0.801
nikA_1
Nickel-binding periplasmic protein precursor.
 
  
 0.761
KJL48957.1
Hypothetical protein.
 
     0.730
gsiC_1
Glutathione transport system permease protein GsiC.
       0.547
gsiD_1
Glutathione transport system permease protein GsiD.
       0.547
gsiA_1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.547
mshD_1
Mycothiol acetyltransferase.
 
     0.538
fliY_1
Cystine-binding periplasmic protein precursor.
 
     0.476
ntaA_1
Nitrilotriacetate monooxygenase component A.
 
     0.462
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.