Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL48983.1 | KJL48984.1 | RS84_00613 | RS84_00614 | Hypothetical protein; RibD C-terminal domain. | Hypothetical protein. | 0.723 |
KJL48983.1 | KJL48985.1 | RS84_00613 | RS84_00615 | Hypothetical protein; RibD C-terminal domain. | Cupin domain protein. | 0.698 |
KJL48983.1 | KJL48986.1 | RS84_00613 | RS84_00616 | Hypothetical protein; RibD C-terminal domain. | Helix-turn-helix domain protein. | 0.498 |
KJL48983.1 | menA | RS84_00613 | RS84_00612 | Hypothetical protein; RibD C-terminal domain. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.436 |
KJL48983.1 | metH | RS84_00613 | RS84_02281 | Hypothetical protein; RibD C-terminal domain. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.598 |
KJL48984.1 | KJL48983.1 | RS84_00614 | RS84_00613 | Hypothetical protein. | Hypothetical protein; RibD C-terminal domain. | 0.723 |
KJL48984.1 | KJL48985.1 | RS84_00614 | RS84_00615 | Hypothetical protein. | Cupin domain protein. | 0.793 |
KJL48984.1 | KJL48986.1 | RS84_00614 | RS84_00616 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.530 |
KJL48984.1 | menA | RS84_00614 | RS84_00612 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.412 |
KJL48985.1 | KJL48983.1 | RS84_00615 | RS84_00613 | Cupin domain protein. | Hypothetical protein; RibD C-terminal domain. | 0.698 |
KJL48985.1 | KJL48984.1 | RS84_00615 | RS84_00614 | Cupin domain protein. | Hypothetical protein. | 0.793 |
KJL48985.1 | KJL48986.1 | RS84_00615 | RS84_00616 | Cupin domain protein. | Helix-turn-helix domain protein. | 0.743 |
KJL48985.1 | KJL49066.1 | RS84_00615 | RS84_00696 | Cupin domain protein. | NAD dependent epimerase/dehydratase family protein. | 0.421 |
KJL48985.1 | menA | RS84_00615 | RS84_00612 | Cupin domain protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.400 |
KJL48985.1 | metH | RS84_00615 | RS84_02281 | Cupin domain protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.508 |
KJL48985.1 | wcaJ_2 | RS84_00615 | RS84_02354 | Cupin domain protein. | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase. | 0.832 |
KJL48986.1 | KJL48983.1 | RS84_00616 | RS84_00613 | Helix-turn-helix domain protein. | Hypothetical protein; RibD C-terminal domain. | 0.498 |
KJL48986.1 | KJL48984.1 | RS84_00616 | RS84_00614 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.530 |
KJL48986.1 | KJL48985.1 | RS84_00616 | RS84_00615 | Helix-turn-helix domain protein. | Cupin domain protein. | 0.743 |
KJL49066.1 | KJL48985.1 | RS84_00696 | RS84_00615 | NAD dependent epimerase/dehydratase family protein. | Cupin domain protein. | 0.421 |
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