Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46720.1 | KJL48988.1 | RS84_03360 | RS84_00618 | Hypothetical protein. | Hypothetical protein. | 0.591 |
KJL48988.1 | KJL46720.1 | RS84_00618 | RS84_03360 | Hypothetical protein. | Hypothetical protein. | 0.591 |
KJL48988.1 | lrp_2 | RS84_00618 | RS84_00617 | Hypothetical protein. | Leucine-responsive regulatory protein. | 0.602 |
KJL48988.1 | ltaE | RS84_00618 | RS84_00624 | Hypothetical protein. | Low specificity L-threonine aldolase. | 0.715 |
KJL48988.1 | ydfG | RS84_00618 | RS84_00619 | Hypothetical protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | 0.899 |
lrp_2 | KJL48988.1 | RS84_00617 | RS84_00618 | Leucine-responsive regulatory protein. | Hypothetical protein. | 0.602 |
ltaE | KJL48988.1 | RS84_00624 | RS84_00618 | Low specificity L-threonine aldolase. | Hypothetical protein. | 0.715 |
ltaE | ydfG | RS84_00624 | RS84_00619 | Low specificity L-threonine aldolase. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | 0.601 |
ydfG | KJL48988.1 | RS84_00619 | RS84_00618 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | Hypothetical protein. | 0.899 |
ydfG | ltaE | RS84_00619 | RS84_00624 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | Low specificity L-threonine aldolase. | 0.601 |