Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47579.1 | rhtA | RS84_02377 | RS84_00664 | EamA-like transporter family protein. | Threonine/homoserine exporter RhtA. | 0.405 |
fgd_2 | rhtA | RS84_00667 | RS84_00664 | F420-dependent glucose-6-phosphate dehydrogenase. | Threonine/homoserine exporter RhtA. | 0.536 |
fgd_2 | treS | RS84_00667 | RS84_00666 | F420-dependent glucose-6-phosphate dehydrogenase. | Trehalose synthase/amylase TreS. | 0.843 |
fgd_2 | yghA | RS84_00667 | RS84_00665 | F420-dependent glucose-6-phosphate dehydrogenase. | Putative oxidoreductase YghA. | 0.620 |
rhtA | KJL47579.1 | RS84_00664 | RS84_02377 | Threonine/homoserine exporter RhtA. | EamA-like transporter family protein. | 0.405 |
rhtA | fgd_2 | RS84_00664 | RS84_00667 | Threonine/homoserine exporter RhtA. | F420-dependent glucose-6-phosphate dehydrogenase. | 0.536 |
rhtA | treS | RS84_00664 | RS84_00666 | Threonine/homoserine exporter RhtA. | Trehalose synthase/amylase TreS. | 0.474 |
rhtA | yghA | RS84_00664 | RS84_00665 | Threonine/homoserine exporter RhtA. | Putative oxidoreductase YghA. | 0.693 |
treS | fgd_2 | RS84_00666 | RS84_00667 | Trehalose synthase/amylase TreS. | F420-dependent glucose-6-phosphate dehydrogenase. | 0.843 |
treS | rhtA | RS84_00666 | RS84_00664 | Trehalose synthase/amylase TreS. | Threonine/homoserine exporter RhtA. | 0.474 |
treS | yghA | RS84_00666 | RS84_00665 | Trehalose synthase/amylase TreS. | Putative oxidoreductase YghA. | 0.606 |
yghA | fgd_2 | RS84_00665 | RS84_00667 | Putative oxidoreductase YghA. | F420-dependent glucose-6-phosphate dehydrogenase. | 0.620 |
yghA | rhtA | RS84_00665 | RS84_00664 | Putative oxidoreductase YghA. | Threonine/homoserine exporter RhtA. | 0.693 |
yghA | treS | RS84_00665 | RS84_00666 | Putative oxidoreductase YghA. | Trehalose synthase/amylase TreS. | 0.606 |