Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
degU_1 | desK_7 | RS84_00679 | RS84_02485 | Transcriptional regulatory protein DegU. | Sensor histidine kinase DesK. | 0.760 |
degU_1 | narX_1 | RS84_00679 | RS84_00678 | Transcriptional regulatory protein DegU. | Nitrate/nitrite sensor protein NarX. | 0.823 |
degU_2 | desK_7 | RS84_01440 | RS84_02485 | Transcriptional regulatory protein DegU. | Sensor histidine kinase DesK. | 0.764 |
degU_2 | narX_1 | RS84_01440 | RS84_00678 | Transcriptional regulatory protein DegU. | Nitrate/nitrite sensor protein NarX. | 0.722 |
degU_3 | desK_7 | RS84_01804 | RS84_02485 | Transcriptional regulatory protein DegU. | Sensor histidine kinase DesK. | 0.747 |
degU_3 | narX_1 | RS84_01804 | RS84_00678 | Transcriptional regulatory protein DegU. | Nitrate/nitrite sensor protein NarX. | 0.728 |
degU_4 | desK_7 | RS84_02486 | RS84_02485 | Transcriptional regulatory protein DegU. | Sensor histidine kinase DesK. | 0.992 |
degU_4 | narX_1 | RS84_02486 | RS84_00678 | Transcriptional regulatory protein DegU. | Nitrate/nitrite sensor protein NarX. | 0.781 |
desK_7 | degU_1 | RS84_02485 | RS84_00679 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DegU. | 0.760 |
desK_7 | degU_2 | RS84_02485 | RS84_01440 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DegU. | 0.764 |
desK_7 | degU_3 | RS84_02485 | RS84_01804 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DegU. | 0.747 |
desK_7 | degU_4 | RS84_02485 | RS84_02486 | Sensor histidine kinase DesK. | Transcriptional regulatory protein DegU. | 0.992 |
desK_7 | liaR_1 | RS84_02485 | RS84_00152 | Sensor histidine kinase DesK. | Transcriptional regulatory protein LiaR. | 0.758 |
desK_7 | liaR_4 | RS84_02485 | RS84_01930 | Sensor histidine kinase DesK. | Transcriptional regulatory protein LiaR. | 0.746 |
desK_7 | narX_1 | RS84_02485 | RS84_00678 | Sensor histidine kinase DesK. | Nitrate/nitrite sensor protein NarX. | 0.734 |
desK_7 | vraR_1 | RS84_02485 | RS84_00719 | Sensor histidine kinase DesK. | Response regulator protein VraR. | 0.755 |
desK_7 | vraR_5 | RS84_02485 | RS84_02292 | Sensor histidine kinase DesK. | Response regulator protein VraR. | 0.746 |
desK_7 | vraR_6 | RS84_02485 | RS84_02815 | Sensor histidine kinase DesK. | Response regulator protein VraR. | 0.741 |
liaR_1 | desK_7 | RS84_00152 | RS84_02485 | Transcriptional regulatory protein LiaR. | Sensor histidine kinase DesK. | 0.758 |
liaR_1 | narX_1 | RS84_00152 | RS84_00678 | Transcriptional regulatory protein LiaR. | Nitrate/nitrite sensor protein NarX. | 0.751 |
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