Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46196.1 | KJL48801.1 | RS84_02820 | RS84_00968 | Cupin domain protein. | Hypothetical protein. | 0.516 |
KJL46196.1 | betI_2 | RS84_02820 | RS84_00686 | Cupin domain protein. | HTH-type transcriptional regulator BetI. | 0.441 |
KJL46687.1 | KJL48801.1 | RS84_03327 | RS84_00968 | Hypothetical protein. | Hypothetical protein. | 0.708 |
KJL46687.1 | betI_2 | RS84_03327 | RS84_00686 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.405 |
KJL48801.1 | KJL46196.1 | RS84_00968 | RS84_02820 | Hypothetical protein. | Cupin domain protein. | 0.516 |
KJL48801.1 | KJL46687.1 | RS84_00968 | RS84_03327 | Hypothetical protein. | Hypothetical protein. | 0.708 |
KJL48801.1 | atzE | RS84_00968 | RS84_00688 | Hypothetical protein. | Biuret hydrolase. | 0.494 |
KJL48801.1 | betI_2 | RS84_00968 | RS84_00686 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.461 |
KJL49392.1 | betI_2 | RS84_00101 | RS84_00686 | Hypothetical protein. | HTH-type transcriptional regulator BetI. | 0.442 |
aguA | atzE | RS84_00687 | RS84_00688 | Putative agmatine deiminase; Belongs to the agmatine deiminase family. | Biuret hydrolase. | 0.822 |
aguA | betI_2 | RS84_00687 | RS84_00686 | Putative agmatine deiminase; Belongs to the agmatine deiminase family. | HTH-type transcriptional regulator BetI. | 0.712 |
aguA | ddc_1 | RS84_00687 | RS84_00685 | Putative agmatine deiminase; Belongs to the agmatine deiminase family. | L-2,4-diaminobutyrate decarboxylase. | 0.668 |
atzE | KJL48801.1 | RS84_00688 | RS84_00968 | Biuret hydrolase. | Hypothetical protein. | 0.494 |
atzE | aguA | RS84_00688 | RS84_00687 | Biuret hydrolase. | Putative agmatine deiminase; Belongs to the agmatine deiminase family. | 0.822 |
atzE | betI_2 | RS84_00688 | RS84_00686 | Biuret hydrolase. | HTH-type transcriptional regulator BetI. | 0.786 |
atzE | ddc_1 | RS84_00688 | RS84_00685 | Biuret hydrolase. | L-2,4-diaminobutyrate decarboxylase. | 0.557 |
betI_2 | KJL46196.1 | RS84_00686 | RS84_02820 | HTH-type transcriptional regulator BetI. | Cupin domain protein. | 0.441 |
betI_2 | KJL46687.1 | RS84_00686 | RS84_03327 | HTH-type transcriptional regulator BetI. | Hypothetical protein. | 0.405 |
betI_2 | KJL48801.1 | RS84_00686 | RS84_00968 | HTH-type transcriptional regulator BetI. | Hypothetical protein. | 0.461 |
betI_2 | KJL49392.1 | RS84_00686 | RS84_00101 | HTH-type transcriptional regulator BetI. | Hypothetical protein. | 0.442 |
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