Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL49107.1 | KJL49108.1 | RS84_00738 | RS84_00739 | Hypothetical protein. | Eco57I restriction-modification methylase. | 0.994 |
KJL49107.1 | KJL49109.1 | RS84_00738 | RS84_00740 | Hypothetical protein. | Hypothetical protein. | 0.957 |
KJL49107.1 | KJL49110.1 | RS84_00738 | RS84_00741 | Hypothetical protein. | Anaerobic benzoate catabolism transcriptional regulator. | 0.554 |
KJL49107.1 | polA_2 | RS84_00738 | RS84_03006 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.767 |
KJL49107.1 | rplF | RS84_00738 | RS84_00527 | Hypothetical protein. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.548 |
KJL49107.1 | rpoA | RS84_00738 | RS84_00514 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.916 |
KJL49107.1 | rpoB | RS84_00738 | RS84_02310 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.913 |
KJL49107.1 | rpoC | RS84_00738 | RS84_02311 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.606 |
KJL49107.1 | rpoZ | RS84_00738 | RS84_02980 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.914 |
KJL49107.1 | ypcP | RS84_00738 | RS84_02645 | Hypothetical protein. | 5'-3' exonuclease. | 0.741 |
KJL49108.1 | KJL49107.1 | RS84_00739 | RS84_00738 | Eco57I restriction-modification methylase. | Hypothetical protein. | 0.994 |
KJL49108.1 | KJL49109.1 | RS84_00739 | RS84_00740 | Eco57I restriction-modification methylase. | Hypothetical protein. | 0.961 |
KJL49108.1 | KJL49110.1 | RS84_00739 | RS84_00741 | Eco57I restriction-modification methylase. | Anaerobic benzoate catabolism transcriptional regulator. | 0.571 |
KJL49109.1 | KJL49107.1 | RS84_00740 | RS84_00738 | Hypothetical protein. | Hypothetical protein. | 0.957 |
KJL49109.1 | KJL49108.1 | RS84_00740 | RS84_00739 | Hypothetical protein. | Eco57I restriction-modification methylase. | 0.961 |
KJL49109.1 | KJL49110.1 | RS84_00740 | RS84_00741 | Hypothetical protein. | Anaerobic benzoate catabolism transcriptional regulator. | 0.554 |
KJL49110.1 | KJL49107.1 | RS84_00741 | RS84_00738 | Anaerobic benzoate catabolism transcriptional regulator. | Hypothetical protein. | 0.554 |
KJL49110.1 | KJL49108.1 | RS84_00741 | RS84_00739 | Anaerobic benzoate catabolism transcriptional regulator. | Eco57I restriction-modification methylase. | 0.571 |
KJL49110.1 | KJL49109.1 | RS84_00741 | RS84_00740 | Anaerobic benzoate catabolism transcriptional regulator. | Hypothetical protein. | 0.554 |
polA_2 | KJL49107.1 | RS84_03006 | RS84_00738 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Hypothetical protein. | 0.767 |
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