Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL46801.1 | KJL48621.1 | RS84_03442 | RS84_00788 | Hypothetical protein. | Hypothetical protein. | 0.537 |
KJL47505.1 | KJL48621.1 | RS84_02299 | RS84_00788 | Hypothetical protein. | Hypothetical protein. | 0.418 |
KJL47731.1 | KJL48621.1 | RS84_02530 | RS84_00788 | Hypothetical protein. | Hypothetical protein. | 0.488 |
KJL48621.1 | KJL46801.1 | RS84_00788 | RS84_03442 | Hypothetical protein. | Hypothetical protein. | 0.537 |
KJL48621.1 | KJL47505.1 | RS84_00788 | RS84_02299 | Hypothetical protein. | Hypothetical protein. | 0.418 |
KJL48621.1 | KJL47731.1 | RS84_00788 | RS84_02530 | Hypothetical protein. | Hypothetical protein. | 0.488 |
KJL48621.1 | KJL48623.1 | RS84_00788 | RS84_00790 | Hypothetical protein. | Ureidoglycolate lyase. | 0.459 |
KJL48621.1 | KJL48834.1 | RS84_00788 | RS84_00462 | Hypothetical protein. | Hypothetical protein. | 0.571 |
KJL48621.1 | xecE | RS84_00788 | RS84_00789 | Hypothetical protein. | 2-(S)-hydroxypropyl-CoM dehydrogenase. | 0.459 |
KJL48623.1 | KJL48621.1 | RS84_00790 | RS84_00788 | Ureidoglycolate lyase. | Hypothetical protein. | 0.459 |
KJL48623.1 | xecE | RS84_00790 | RS84_00789 | Ureidoglycolate lyase. | 2-(S)-hydroxypropyl-CoM dehydrogenase. | 0.846 |
KJL48834.1 | KJL48621.1 | RS84_00462 | RS84_00788 | Hypothetical protein. | Hypothetical protein. | 0.571 |
xecE | KJL48621.1 | RS84_00789 | RS84_00788 | 2-(S)-hydroxypropyl-CoM dehydrogenase. | Hypothetical protein. | 0.459 |
xecE | KJL48623.1 | RS84_00789 | RS84_00790 | 2-(S)-hydroxypropyl-CoM dehydrogenase. | Ureidoglycolate lyase. | 0.846 |