STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdh_1D-threo-aldose 1-dehydrogenase. (320 aa)    
Predicted Functional Partners:
KJL48614.1
Amidohydrolase.
 
  0.965
KJL48639.1
Amidohydrolase.
  
 
  0.883
KJL48624.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
    0.877
fucU
L-fucose mutarotase; Belongs to the RbsD / FucU family.
 
     0.812
kdgK_3
2-dehydro-3-deoxygluconokinase.
  
  
  0.789
xecE
2-(S)-hydroxypropyl-CoM dehydrogenase.
 
  
  0.767
fdh_2
D-threo-aldose 1-dehydrogenase.
  
  
 
0.729
KJL48623.1
Ureidoglycolate lyase.
 
    0.606
hisN
Histidinol-phosphatase.
   
 
  0.589
KJL48627.1
Glyoxalase-like domain protein.
       0.539
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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