Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47194.1 | KJL48646.1 | RS84_01983 | RS84_00813 | Putative endoglucanase. | Hypothetical protein. | 0.702 |
KJL47194.1 | yesX_1 | RS84_01983 | RS84_01410 | Putative endoglucanase. | Rhamnogalacturonan exolyase YesX. | 0.582 |
KJL47973.1 | KJL48646.1 | RS84_01602 | RS84_00813 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.693 |
KJL47973.1 | KJL48693.1 | RS84_01602 | RS84_00860 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Cadherin-like beta sandwich domain protein. | 0.520 |
KJL47973.1 | pelA_2 | RS84_01602 | RS84_03215 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Pectate trisaccharide-lyase precursor. | 0.742 |
KJL47973.1 | pgl_2 | RS84_01602 | RS84_01976 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.523 |
KJL47973.1 | rhgT | RS84_01602 | RS84_02057 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Rhamnogalacturonan acetylesterase RhgT. | 0.528 |
KJL47973.1 | xsa | RS84_01602 | RS84_00865 | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Xylosidase/arabinosidase. | 0.627 |
KJL48646.1 | KJL47194.1 | RS84_00813 | RS84_01983 | Hypothetical protein. | Putative endoglucanase. | 0.702 |
KJL48646.1 | KJL47973.1 | RS84_00813 | RS84_01602 | Hypothetical protein. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.693 |
KJL48646.1 | KJL48693.1 | RS84_00813 | RS84_00860 | Hypothetical protein. | Cadherin-like beta sandwich domain protein. | 0.658 |
KJL48646.1 | KJL49129.1 | RS84_00813 | RS84_00760 | Hypothetical protein. | Alpha-L-fucosidase. | 0.917 |
KJL48646.1 | pelA_2 | RS84_00813 | RS84_03215 | Hypothetical protein. | Pectate trisaccharide-lyase precursor. | 0.717 |
KJL48646.1 | pgl_2 | RS84_00813 | RS84_01976 | Hypothetical protein. | Polygalacturonase; Belongs to the glycosyl hydrolase 28 family. | 0.853 |
KJL48646.1 | rhgT | RS84_00813 | RS84_02057 | Hypothetical protein. | Rhamnogalacturonan acetylesterase RhgT. | 0.813 |
KJL48646.1 | xsa | RS84_00813 | RS84_00865 | Hypothetical protein. | Xylosidase/arabinosidase. | 0.681 |
KJL48646.1 | yesX_1 | RS84_00813 | RS84_01410 | Hypothetical protein. | Rhamnogalacturonan exolyase YesX. | 0.697 |
KJL48646.1 | yesX_2 | RS84_00813 | RS84_02028 | Hypothetical protein. | Rhamnogalacturonan exolyase YesX. | 0.670 |
KJL48693.1 | KJL47973.1 | RS84_00860 | RS84_01602 | Cadherin-like beta sandwich domain protein. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.520 |
KJL48693.1 | KJL48646.1 | RS84_00860 | RS84_00813 | Cadherin-like beta sandwich domain protein. | Hypothetical protein. | 0.658 |
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