Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL48684.1 | ampC_1 | RS84_00851 | RS84_00852 | MarR family protein. | Beta-lactamase precursor. | 0.617 |
ampC_1 | KJL48684.1 | RS84_00852 | RS84_00851 | Beta-lactamase precursor. | MarR family protein. | 0.617 |
ampC_1 | guaA_2 | RS84_00852 | RS84_02408 | Beta-lactamase precursor. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.512 |
ampC_1 | yhcR | RS84_00852 | RS84_02394 | Beta-lactamase precursor. | Endonuclease YhcR precursor. | 0.417 |
guaA_2 | ampC_1 | RS84_02408 | RS84_00852 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Beta-lactamase precursor. | 0.512 |
guaA_2 | yhcR | RS84_02408 | RS84_02394 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Endonuclease YhcR precursor. | 0.909 |
yhcR | ampC_1 | RS84_02394 | RS84_00852 | Endonuclease YhcR precursor. | Beta-lactamase precursor. | 0.417 |
yhcR | guaA_2 | RS84_02394 | RS84_02408 | Endonuclease YhcR precursor. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.909 |