STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL48689.1Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor. (721 aa)    
Predicted Functional Partners:
KJL48691.1
Hypothetical protein.
 
     0.831
KJL48690.1
Glycosyl hydrolases family 43.
    
0.824
abn-ts
Intracellular endo-alpha-(1->5)-L-arabinanase.
 
     0.775
abn2
Extracellular endo-alpha-(1->5)-L-arabinanase 2 precursor.
 
     0.750
rhgT
Rhamnogalacturonan acetylesterase RhgT.
  
     0.748
xynB_2
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.677
yesX_2
Rhamnogalacturonan exolyase YesX.
  
     0.671
xynD
Arabinoxylan arabinofuranohydrolase precursor.
  
     0.627
pelA_1
Pectate trisaccharide-lyase precursor.
  
     0.608
KJL48693.1
Cadherin-like beta sandwich domain protein.
 
    
0.606
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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