STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL48696.1Hypothetical protein. (356 aa)    
Predicted Functional Partners:
KJL48695.1
Hypothetical protein.
 
     0.934
KJL48697.1
Hypothetical protein.
       0.773
KJL48699.1
Glycosyl hydrolases family 43.
 
     0.713
xsa
Xylosidase/arabinosidase.
 
     0.701
KJL49470.1
Hypothetical protein.
  
     0.626
xynD
Arabinoxylan arabinofuranohydrolase precursor.
 
     0.616
KJL48691.1
Hypothetical protein.
 
     0.604
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
    
  0.603
KJL48694.1
Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor.
 
     0.588
msmE_9
Multiple sugar-binding protein precursor.
  
     0.582
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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