Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
araG | lacI_4 | RS84_00874 | RS84_00871 | Arabinose import ATP-binding protein AraG. | Lactose operon repressor. | 0.416 |
araG | rbsA_2 | RS84_00874 | RS84_00872 | Arabinose import ATP-binding protein AraG. | Ribose import ATP-binding protein RbsA. | 0.887 |
araG | rbsB | RS84_00874 | RS84_01451 | Arabinose import ATP-binding protein AraG. | D-ribose-binding periplasmic protein precursor. | 0.836 |
araG | rbsC | RS84_00874 | RS84_01450 | Arabinose import ATP-binding protein AraG. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.915 |
araG | xylH_1 | RS84_00874 | RS84_00306 | Arabinose import ATP-binding protein AraG. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.805 |
araG | xylH_2 | RS84_00874 | RS84_01668 | Arabinose import ATP-binding protein AraG. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.885 |
araG | yjfF | RS84_00874 | RS84_00876 | Arabinose import ATP-binding protein AraG. | Inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. | 0.996 |
araG | ytfQ | RS84_00874 | RS84_00873 | Arabinose import ATP-binding protein AraG. | ABC transporter periplasmic-binding protein YtfQ precursor. | 0.994 |
araG | ytfT | RS84_00874 | RS84_00875 | Arabinose import ATP-binding protein AraG. | Inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family. | 0.996 |
lacI_4 | araG | RS84_00871 | RS84_00874 | Lactose operon repressor. | Arabinose import ATP-binding protein AraG. | 0.416 |
lacI_4 | rbsA_2 | RS84_00871 | RS84_00872 | Lactose operon repressor. | Ribose import ATP-binding protein RbsA. | 0.796 |
lacI_4 | yjfF | RS84_00871 | RS84_00876 | Lactose operon repressor. | Inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. | 0.500 |
lacI_4 | ytfQ | RS84_00871 | RS84_00873 | Lactose operon repressor. | ABC transporter periplasmic-binding protein YtfQ precursor. | 0.640 |
lacI_4 | ytfT | RS84_00871 | RS84_00875 | Lactose operon repressor. | Inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family. | 0.519 |
rbsA_2 | araG | RS84_00872 | RS84_00874 | Ribose import ATP-binding protein RbsA. | Arabinose import ATP-binding protein AraG. | 0.887 |
rbsA_2 | lacI_4 | RS84_00872 | RS84_00871 | Ribose import ATP-binding protein RbsA. | Lactose operon repressor. | 0.796 |
rbsA_2 | rbsB | RS84_00872 | RS84_01451 | Ribose import ATP-binding protein RbsA. | D-ribose-binding periplasmic protein precursor. | 0.859 |
rbsA_2 | rbsC | RS84_00872 | RS84_01450 | Ribose import ATP-binding protein RbsA. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.920 |
rbsA_2 | xylG_2 | RS84_00872 | RS84_01667 | Ribose import ATP-binding protein RbsA. | Xylose import ATP-binding protein XylG. | 0.623 |
rbsA_2 | xylH_1 | RS84_00872 | RS84_00306 | Ribose import ATP-binding protein RbsA. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.806 |
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