Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
axeA | csxA | RS84_01007 | RS84_01013 | Cephalosporin-C deacetylase. | Exo-beta-D-glucosaminidase precursor. | 0.517 |
axeA | exuR_2 | RS84_01007 | RS84_01008 | Cephalosporin-C deacetylase. | Putative HTH-type transcriptional repressor ExuR. | 0.631 |
axeA | msmE_3 | RS84_01007 | RS84_01010 | Cephalosporin-C deacetylase. | Multiple sugar-binding protein precursor. | 0.459 |
axeA | rbsR_1 | RS84_01007 | RS84_01009 | Cephalosporin-C deacetylase. | Ribose operon repressor. | 0.631 |
csxA | axeA | RS84_01013 | RS84_01007 | Exo-beta-D-glucosaminidase precursor. | Cephalosporin-C deacetylase. | 0.517 |
csxA | exuR_2 | RS84_01013 | RS84_01008 | Exo-beta-D-glucosaminidase precursor. | Putative HTH-type transcriptional repressor ExuR. | 0.496 |
csxA | msmE_3 | RS84_01013 | RS84_01010 | Exo-beta-D-glucosaminidase precursor. | Multiple sugar-binding protein precursor. | 0.730 |
csxA | ptsG | RS84_01013 | RS84_02565 | Exo-beta-D-glucosaminidase precursor. | PTS system glucose-specific EIICBA component. | 0.401 |
exuR_2 | axeA | RS84_01008 | RS84_01007 | Putative HTH-type transcriptional repressor ExuR. | Cephalosporin-C deacetylase. | 0.631 |
exuR_2 | csxA | RS84_01008 | RS84_01013 | Putative HTH-type transcriptional repressor ExuR. | Exo-beta-D-glucosaminidase precursor. | 0.496 |
exuR_2 | gltB_1 | RS84_01008 | RS84_02996 | Putative HTH-type transcriptional repressor ExuR. | Glutamate synthase [NADPH] large chain. | 0.705 |
exuR_2 | guaA_2 | RS84_01008 | RS84_02408 | Putative HTH-type transcriptional repressor ExuR. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.501 |
exuR_2 | msmE_3 | RS84_01008 | RS84_01010 | Putative HTH-type transcriptional repressor ExuR. | Multiple sugar-binding protein precursor. | 0.504 |
exuR_2 | pheT | RS84_01008 | RS84_00442 | Putative HTH-type transcriptional repressor ExuR. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.501 |
exuR_2 | ptsG | RS84_01008 | RS84_02565 | Putative HTH-type transcriptional repressor ExuR. | PTS system glucose-specific EIICBA component. | 0.724 |
exuR_2 | ptsI_2 | RS84_01008 | RS84_02527 | Putative HTH-type transcriptional repressor ExuR. | Phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family. | 0.663 |
exuR_2 | rbsR_1 | RS84_01008 | RS84_01009 | Putative HTH-type transcriptional repressor ExuR. | Ribose operon repressor. | 0.838 |
exuR_2 | ribBA_2 | RS84_01008 | RS84_03689 | Putative HTH-type transcriptional repressor ExuR. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.501 |
gltB_1 | exuR_2 | RS84_02996 | RS84_01008 | Glutamate synthase [NADPH] large chain. | Putative HTH-type transcriptional repressor ExuR. | 0.705 |
gltB_1 | guaA_2 | RS84_02996 | RS84_02408 | Glutamate synthase [NADPH] large chain. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.975 |
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