STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmE_3Multiple sugar-binding protein precursor. (437 aa)    
Predicted Functional Partners:
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
  0.949
araQ_11
L-arabinose transport system permease protein AraQ.
 
  0.946
KJL48255.1
Hypothetical protein.
 
     0.906
msmE_5
Multiple sugar-binding protein precursor.
  
  
  0.800
KJL48256.1
Mannan endo-1,4-beta-mannosidase precursor; Belongs to the glycosyl hydrolase 26 family.
 
     0.782
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
   
  0.761
KJL48740.1
Putative sugar-binding periplasmic protein precursor.
  
  
  0.748
csxA
Exo-beta-D-glucosaminidase precursor.
 
     0.730
araP_3
L-arabinose transport system permease protein AraP.
 
 0.718
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
   
  0.715
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
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