STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csxAExo-beta-D-glucosaminidase precursor. (827 aa)    
Predicted Functional Partners:
KJL48255.1
Hypothetical protein.
 
     0.825
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
    0.816
araQ_11
L-arabinose transport system permease protein AraQ.
 
     0.805
msmE_3
Multiple sugar-binding protein precursor.
 
     0.730
lacC
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.592
KJL48256.1
Mannan endo-1,4-beta-mannosidase precursor; Belongs to the glycosyl hydrolase 26 family.
 
     0.583
KJL48615.1
Hypothetical protein.
    
  0.541
axeA
Cephalosporin-C deacetylase.
 
     0.517
exuR_2
Putative HTH-type transcriptional repressor ExuR.
 
     0.496
KJL47963.1
Beta-galactosidase III.
  
 
  0.489
Your Current Organism:
Microbacterium hydrocarbonoxydans
NCBI taxonomy Id: 273678
Other names: DSM 16089, JCM 14340, M. hydrocarbonoxydans, Microbacterium hydrocarbonoxydans Schippers et al. 2005, NBRC 103074, NCIMB 14002, strain BNP48
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.