Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL48340.1 | fabG_2 | RS84_01099 | RS84_01100 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.704 |
KJL48340.1 | lvr_1 | RS84_01099 | RS84_01102 | Hypothetical protein. | Levodione reductase. | 0.768 |
KJL48340.1 | mdlA_1 | RS84_01099 | RS84_01101 | Hypothetical protein. | Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.793 |
KJL48340.1 | ptsG | RS84_01099 | RS84_02565 | Hypothetical protein. | PTS system glucose-specific EIICBA component. | 0.951 |
fabD | fabF | RS84_02843 | RS84_02840 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.999 |
fabD | fabG1 | RS84_02843 | RS84_02826 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | 0.984 |
fabD | fabG_2 | RS84_02843 | RS84_01100 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.783 |
fabD | fabG_3 | RS84_02843 | RS84_01106 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.735 |
fabD | lvr_1 | RS84_02843 | RS84_01102 | Malonyl CoA-acyl carrier protein transacylase. | Levodione reductase. | 0.785 |
fabF | fabD | RS84_02840 | RS84_02843 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
fabF | fabG1 | RS84_02840 | RS84_02826 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | 0.984 |
fabF | fabG_2 | RS84_02840 | RS84_01100 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.949 |
fabF | fabG_3 | RS84_02840 | RS84_01106 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.941 |
fabF | lvr_1 | RS84_02840 | RS84_01102 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Levodione reductase. | 0.791 |
fabG1 | fabD | RS84_02826 | RS84_02843 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | Malonyl CoA-acyl carrier protein transacylase. | 0.984 |
fabG1 | fabF | RS84_02826 | RS84_02840 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.984 |
fabG1 | fabG_2 | RS84_02826 | RS84_01100 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.736 |
fabG1 | fabG_3 | RS84_02826 | RS84_01106 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.757 |
fabG1 | gltB_1 | RS84_02826 | RS84_02996 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | Glutamate synthase [NADPH] large chain. | 0.772 |
fabG1 | paaE | RS84_02826 | RS84_02497 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.752 |
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