Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL47886.1 | KJL47887.1 | RS84_01514 | RS84_01515 | Hypothetical protein. | Hypothetical protein. | 0.636 |
KJL47886.1 | KJL47888.1 | RS84_01514 | RS84_01516 | Hypothetical protein. | Hypothetical protein. | 0.608 |
KJL47886.1 | cdhR_2 | RS84_01514 | RS84_01513 | Hypothetical protein. | HTH-type transcriptional regulator CdhR. | 0.532 |
KJL47887.1 | KJL47886.1 | RS84_01515 | RS84_01514 | Hypothetical protein. | Hypothetical protein. | 0.636 |
KJL47887.1 | KJL47888.1 | RS84_01515 | RS84_01516 | Hypothetical protein. | Hypothetical protein. | 0.737 |
KJL47887.1 | cdhR_2 | RS84_01515 | RS84_01513 | Hypothetical protein. | HTH-type transcriptional regulator CdhR. | 0.447 |
KJL47888.1 | KJL47886.1 | RS84_01516 | RS84_01514 | Hypothetical protein. | Hypothetical protein. | 0.608 |
KJL47888.1 | KJL47887.1 | RS84_01516 | RS84_01515 | Hypothetical protein. | Hypothetical protein. | 0.737 |
KJL47888.1 | cdhR_2 | RS84_01516 | RS84_01513 | Hypothetical protein. | HTH-type transcriptional regulator CdhR. | 0.429 |
alkA_2 | cdhR_2 | RS84_02433 | RS84_01513 | DNA-3-methyladenine glycosylase 2. | HTH-type transcriptional regulator CdhR. | 0.434 |
alkA_2 | lexA | RS84_02433 | RS84_00421 | DNA-3-methyladenine glycosylase 2. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.406 |
alkA_2 | sigA | RS84_02433 | RS84_02890 | DNA-3-methyladenine glycosylase 2. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.626 |
cdhR_2 | KJL47886.1 | RS84_01513 | RS84_01514 | HTH-type transcriptional regulator CdhR. | Hypothetical protein. | 0.532 |
cdhR_2 | KJL47887.1 | RS84_01513 | RS84_01515 | HTH-type transcriptional regulator CdhR. | Hypothetical protein. | 0.447 |
cdhR_2 | KJL47888.1 | RS84_01513 | RS84_01516 | HTH-type transcriptional regulator CdhR. | Hypothetical protein. | 0.429 |
cdhR_2 | alkA_2 | RS84_01513 | RS84_02433 | HTH-type transcriptional regulator CdhR. | DNA-3-methyladenine glycosylase 2. | 0.434 |
cdhR_2 | lexA | RS84_01513 | RS84_00421 | HTH-type transcriptional regulator CdhR. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.418 |
cdhR_2 | sigA | RS84_01513 | RS84_02890 | HTH-type transcriptional regulator CdhR. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.605 |
cdhR_2 | yesS | RS84_01513 | RS84_01559 | HTH-type transcriptional regulator CdhR. | HTH-type transcriptional regulator YesS. | 0.507 |
lexA | alkA_2 | RS84_00421 | RS84_02433 | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | DNA-3-methyladenine glycosylase 2. | 0.406 |
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